RetrogeneDB ID: | retro_tbel_1930 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_6019:4745..5161(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.57 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNP.VTSD.SKNRKRHFNAPSHIRRKIMSS.LSKELRQKYNV.SMPIRKDDEVQVV.GH.KGQQ.GKV | |
Retrocopy | MKFNPSVTSDQSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNV*SMPIRKDDEVQVV*GHSKGQQTGKV |
Parental | VQVYR-KKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS |
VQVYR.KKYV.YIE.VQREKANGT.VH.G.H.SKVVITRLK.DKD.K.ILERKAKSRQVGKEK...K... | |
Retrocopy | VQVYR<KKYVTYIEQVQREKANGTAVHEGFHLSKVVITRLKMDKDHKEILERKAKSRQVGKEKGKYKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |