RetrogeneDB ID: | retro_tbel_2778 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_118840:1116..1566(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.72 % |
Parental protein coverage: | 97.39 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 6 |
Parental | NPFVTSDRSKNRKRHFNAPSHIRRKIMSSLSK-ELRQKY-NVRSMPI-RKDDEVQVVRGHYKGQQIGKVV |
.PF..SDRSKN..RHFNAPSHI.RKIMSS....ELRQKY..V.SM.I.RKDDEVQVV.GHYKGQQ.G.VV | |
Retrocopy | HPFMISDRSKNHIRHFNAPSHIQRKIMSSPIS>ELRQKY<HVPSMTI<RKDDEVQVV*GHYKGQQTGNVV |
Parental | QVYRKKYVIYIERVQREKANGTTVHVGIHP-SKVVITRLKLDKDRKKILE-RKAKSRQVGKEKN-IRKK- |
.VY.KKYVIY.ERVQ.EKA..T.VH.GIH..SK.VITRLKLDKDRKKILE..KAKS.QVGKEK...R.K. | |
Retrocopy | *VYSKKYVIYTERVQQEKAKATAVHAGIHS<SKAVITRLKLDKDRKKILE>QKAKSLQVGKEKG>NRRKK |
Parental | QSRRCRSKIILYAILI |
Q.RRCR.KIIL..ILI | |
Retrocopy | QLRRCRRKIILHTILI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |