RetrogeneDB ID: | retro_tbel_3964 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_45705:1124..1540(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.39 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MKFNPFVTSDRSKNRKRHFNAPS-HIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKF.PF.TSD.SKN.KRHFNAPS.HI.RKIMSS.LSKELRQKY.VRSMP.RKDDEVQVVRGHY.GQQIGK | |
Retrocopy | MKFHPFMTSDPSKNCKRHFNAPS<HIQRKIMSSPLSKELRQKYSVRSMPVRKDDEVQVVRGHYEGQQIGK |
Parental | VVQVYRKKYVIYIERV-QREKANGTTVHV-GIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKK |
VVQVYRKKYVIYIERV...EKA.GTTVHV.GIHPSKVVITR.KLDKD.KKILERK.KSRQV.KEK...K. | |
Retrocopy | VVQVYRKKYVIYIERV<EWEKAKGTTVHV>GIHPSKVVITRWKLDKDCKKILERKTKSRQVEKEKSKYKE |
Parental | QS |
.. | |
Retrocopy | ET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |