RetrogeneDB ID: | retro_tbel_3187 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_133413:104862..105273(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.43 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSL-SKELRQKYNVRSMPIRKDDEVQVVRGHYK-GQQIGK |
MKFNPFVTSDRSKN..RHFNAPSH...KIMSS..S.ELR.KYNV...PI.KDDE.QV.RGH.K.GQQIGK | |
Retrocopy | MKFNPFVTSDRSKNCGRHFNAPSHMCGKIMSSP>SEELRPKYNV*PVPILKDDEAQVERGHSK<GQQIGK |
Parental | VVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS |
VVQV.........ERVQ.E.A.GT.V.V.IHPS.VV.T.LKLD.DRKKILE.KAK....GKEK...K... | |
Retrocopy | VVQVAGRN-MSPTERVQWEQADGTSVPVAIHPSRVVLTGLKLDQDRKKILEWKAKAH*LGKEKGKYKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |