RetrogeneDB ID: | retro_tbel_2500 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_112149:241773..242190(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.89 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MKFNPFVTSDRSKNRKRHFNA-PSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKF.PFVTSD.SKN.K.HFNA.PS.I...I..S.LSKELRQK.NV.SMPIRKDDEVQ.VRGHYKGQQ.GK | |
Retrocopy | MKFDPFVTSDQSKNHKSHFNA>PSDICKEILTSPLSKELRQK*NV*SMPIRKDDEVQLVRGHYKGQQMGK |
Parental | VVQVYRKKYVIYIERVQREKANGTTVH-VGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQ |
VVQ.YRKK.VIYI.RVQ.EKANGTT.H..GIHPSKVVI.R.KLDKD.KKILERKAKS.Q.GKEK...K.. | |
Retrocopy | VVQAYRKKSVIYIDRVQ*EKANGTTIH<WGIHPSKVVIIR*KLDKDLKKILERKAKSHQAGKEKSKYKEE |
Parental | S |
. | |
Retrocopy | T |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |