RetrogeneDB ID: | retro_chof_1714 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_365180:770..1214(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSCHOG00000003358 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 53.38 % |
Parental protein coverage: | 90.8 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | FVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTISQDYGVL |
FVCPTEI.AF.D.A..F......V...SVDSHF.HLAW.NTP.K..GL..MNI.L.SD....ISQDYGVL | |
Retrocopy | FVCPTEIVAFGDKANGFHDVSYEVLSVSVDSHFSHLAWINTPRKNDGLDHMNITLLSDLTKQISQDYGVL |
Parental | KADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQ |
....G....GLFI.D..G......V.DLPVG..V.ET..LV.AF.F....GEV.PA.W...S.TIKP... | |
Retrocopy | LEGAGLAQKGLFITDPNGVIKHLSVSDLPVGQCVEETVHLVKAFLFVGTRGEVFPANWTLDSPTIKPNPT |
Parental | KSKEYFSK |
.SKE.F.. | |
Retrocopy | ASKE*FEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |