RetrogeneDB ID: | retro_ogar_1588 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873554.1:1536249..1536845(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000026268 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000002303 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.05 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYRGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN |
MS.GNAKIGHP.PNFKATAVMPDGQFKDISL.DYRG.YVVFF.YPLDFTFVCPTEI.AFSDRAEEFKKLN | |
Retrocopy | MSAGNAKIGHPDPNFKATAVMPDGQFKDISLHDYRGEYVVFF-YPLDFTFVCPTEIVAFSDRAEEFKKLN |
Parental | CQVIGASVDSHFCHLAWINT-PKKQGG-LGPMNIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGT |
CQVIGASVDSHFCHL....T...K..G.LGP..IPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGT | |
Retrocopy | CQVIGASVDSHFCHLVCGST<TPKKQGGLGPTSIPLVSDPKRTIAQDYGVLKADEGISFRGLFIIDDKGT |
Parental | LRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDVQKSKEYFSKQK |
L.QITVNDLPVG.SVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPD..KSKEYFSKQK | |
Retrocopy | LWQITVNDLPVGCSVDETLRLVQAFQFTDKHGEVCPAGWKPGSDTIKPDI*KSKEYFSKQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |