RetrogeneDB ID: | retro_tsyr_1781 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_583068:8..455(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSTSYG00000011031 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 92.62 % |
Parental protein coverage: | 94.23 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSSGNAKIGHPAPNFKATAVMPDGQFRDINLSDYKGKYVVLF--PLDFTFVCPTEIIAFSDRAEEFKKLN |
MSSGNAKIGHPAP.FKATAVMPDGQF.DI.LSDYKGKYVV.F..PLDFTFV.PTEIIAFSDRAEEFKKLN | |
Retrocopy | MSSGNAKIGHPAPRFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVYPTEIIAFSDRAEEFKKLN |
Parental | CQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRAIAQDYGVLKADEGISFRGLFIIDDKGILR |
C.VIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKR.IAQDYGVLKADEGISFRGLFIIDDKGILR | |
Retrocopy | C*VIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRSIAQDYGVLKADEGISFRGLFIIDDKGILR |
Parental | PITVNDLPV |
.ITV.DLPV | |
Retrocopy | KITVKDLPV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |