RetrogeneDB ID: | retro_sara_370 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_181534:937..1450(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSSARG00000004703 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 99.42 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN |
MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN | |
Retrocopy | MSSGNAKIGHPAPNFKATAVMPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLN |
Parental | CQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRAIAQDYGVLKADEGISFRGLFIIDDKGILR |
CQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRAIAQDYGVLKADEGISFRGLFIIDDKGIL. | |
Retrocopy | CQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRAIAQDYGVLKADEGISFRGLFIIDDKGILW |
Parental | QITVNDLPVGRSVDETLRLVQAFQFTDKHGE |
QITVNDLPVGRSVDETLRLVQAFQFTDKHGE | |
Retrocopy | QITVNDLPVGRSVDETLRLVQAFQFTDKHGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |