RetrogeneDB ID: | retro_chof_134 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | GeneScaffold_291:64443..64926(+) | ||
Located in intron of: | ENSCHOG00000000837 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX1 | ||
Ensembl ID: | ENSCHOG00000003358 | ||
Aliases: | None | ||
Description: | peroxiredoxin 1 [Source:HGNC Symbol;Acc:9352] |
Percent Identity: | 65.84 % |
Parental protein coverage: | 98.77 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVS |
KY.V.FFYPLDFTFVCPTEI.AFSD.A.EF...NC.V...SVDS.F.HLAW.N.P.K.GGLG.MNI.L.S | |
Retrocopy | KYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSLFSHLAWINIPRKNGGLGHMNIALLS |
Parental | DPKRTISQDYGVLKADEGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLVQAFQFTDKHGEVCPAG |
D....IS.DYGVL....G...RGLFIID..G......VNDLPVGRSV.ETLRLV.AFQF...HGEVCPA. | |
Retrocopy | DLTKQISRDYGVLLEGAGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFVETHGEVCPAN |
Parental | WKPGSDTIKPDVQKSKEYFSK |
W.P.S.TIKP....SKEYF.K | |
Retrocopy | WTPDSPTIKPNPTASKEYFEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |