Parental gene:

RPS18, ENSMEUG00000016770

Aliases:None
Description:ribosomal protein S18 [Source:HGNC Symbol;Acc:10401]
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_2695:8881..13133(+)


>ENSMEUG00000016770
ATGTCTCTTGTAATCCCCGAGAAGTTCCAGCACATTTTGAGAGTGCTCAACACCAACATTGACGGACGGCGGAAAATAGC
TTTTGCCATCACAGCCATCAAGGGTGTGGGTCGAAGATATGCTCATGTAGTACTGAGGAAAGCAGACATTGACCTCACCA
AGAGGGCTGGTGAGCTCACTGAAGATGAGGTAGAGCGTGTTATCACCATCATGCAGAATCCCCGGCAATACAAGATTCCA
GACTGGTTCCTTAACAGGCAGAAGGATGTAAAGGATGGAAAATATAGCCAGGTTTTGGCCAACGGTCTGGACAATAAGCT
GCGTGAGGATCTGGAGCGACTGAAGAAGATTCGGGCACATCGTGGGCTTCGGCACTTCTGGGGTCTCCGGGTTCGAGGCC
AGCACACCAAGACTACAGGCCGCAGAGGTCGCACTGTGGGTGTGTCCAAGAAGAAGTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002648 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000021650 ortholog_one2one 5 retrogenes
Dasypus novemcinctus ENSDNOG00000012084 ortholog_one2one 13 retrogenes
Erinaceus europaeus ENSEEUG00000010297 ortholog_one2one 8 retrogenes
Homo sapiens ENSG00000231500 ortholog_one2one 2 retrogenes
Gorilla gorilla ENSGGOG00000006571 ortholog_one2one 5 retrogenes
Loxodonta africana ENSLAFG00000032173 possible_ortholog 1 retrogene
Myotis lucifugus ENSMLUG00000007360 possible_ortholog 2 retrogenes
Macaca mulatta ENSMMUG00000003867 possible_ortholog 1 retrogene
Oryctolagus cuniculus ENSOCUG00000010546 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000006225 ortholog_one2one 7 retrogenes
Pongo abelii ENSPPYG00000025953 ortholog_one2one 14 retrogenes
Pan troglodytes ENSPTRG00000018039 ortholog_one2one 1 retrogene
Pteropus vampyrus ENSPVAG00000001902 ortholog_one2one 6 retrogenes
Rattus norvegicus ENSRNOG00000028505 possible_ortholog 4 retrogenes
Sarcophilus harrisii ENSSHAG00000006857 possible_ortholog 2 retrogenes
Sarcophilus harrisii ENSSHAG00000008658 possible_ortholog 1 retrogene
Sus scrofa ENSSSCG00000001502 ortholog_one2one 5 retrogenes
Tupaia belangeri ENSTBEG00000012708 ortholog_one2one 40 retrogenes
Tursiops truncatus ENSTTRG00000004302 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_212 74.23 62.50
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2. retro_meug_310 95.96 64.47
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3. retro_meug_344 92.11 100.00
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4. retro_meug_387 96.69 99.34
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5. retro_meug_566 99.35 100.00
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6. retro_meug_625 78.43 100.00
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7. retro_meug_627 82.88 73.03
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8. retro_meug_1296 89.23 85.53
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9. retro_meug_1737 58.41 74.34
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10. retro_meug_1807 64.58 62.50
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11. retro_meug_1946 71.29 66.45
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Download FASTA sequences of all ENSMEUG00000016770 retrocopies