RetrogeneDB ID: | retro_tbel_941 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3374:206954..207239(-) | ||
Located in intron of: | ENSTBEG00000012518 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSTBEG00000012708 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 85.26 % |
Parental protein coverage: | 62.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | ELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFW |
ELTE.E.ERV.TIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKL.EDL.RLK...AHRGLRHF. | |
Retrocopy | ELTEEEGERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDLGRLKEMWAHRGLRHF* |
Parental | GLRVRGQHTKTTGRRGRTVGVSKKK |
GL.V.GQHTKTTG..G.TVGVSKKK | |
Retrocopy | GLWV*GQHTKTTGCHGPTVGVSKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |