RetrogeneDB ID: | retro_meug_625 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold14859:9234..9691(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSMEUG00000016770 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 78.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKR-AGELTEDEVERVIT |
MSLVIP.K.QHILRVLNTNIDG..KIAFAIT.IK.V..RYAHVVLRKA.IDL.KR.AGEL.E..VE.VIT | |
Retrocopy | MSLVIPKKSQHILRVLNTNIDGWQKIAFAITVIKSVSQRYAHVVLRKAHIDLSKR>AGELIEGKVEYVIT |
Parental | IMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTT |
IMQNP.QYKIPDWFLNRQK.VKDGKYSQVLAN.L..KL.EDLE.LKKI.A..GL.HFWGL.V..QHTKT. | |
Retrocopy | IMQNPWQYKIPDWFLNRQKNVKDGKYSQVLANDLNSKLCEDLEGLKKIQARCGLWHFWGLQVQEQHTKTR |
Parental | GRRGRTVGVSKKK |
G.RG.TV.VSKKK | |
Retrocopy | GCRGHTVNVSKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |