RetrogeneDB ID: | retro_tbel_856 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3162:44035..44325(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSTBEG00000012708 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 76.53 % |
Parental protein coverage: | 63.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AGELTEDEV-ERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLR |
AGELTEDE..E.VIT.M..P.QY.IPDWFLNRQKDVKDGKYSQVLA..LDNKL.E.LERLKKI.AHRGL. | |
Retrocopy | AGELTEDEG<ECVITTMPSPQQYRIPDWFLNRQKDVKDGKYSQVLADSLDNKLCEELERLKKIQAHRGLC |
Parental | HFWGLRVRGQHTKTTGRRGRTVGVSKKK |
HFWGLRV..QHTK..G..G...GVSKKK | |
Retrocopy | HFWGLRV*DQHTKAVGHHGHIMGVSKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |