Parental gene: | RPS18, ENSTBEG00000012708 |
| Aliases: | None |
| Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_5645:38290..43327(+) |
>ENSTBEG00000012708
ATGTCTCTAGTGATCCCTGAGAAGTTCCAGCACATTTTGCGAGTACTCAATACCAACATCGATGGGCGGCGGAAAATAGC
CTTTGCCATCACTGCCATTAAGGGTGTGGGGCGAAGATATGCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTCACCA
AGCGGGCAGGAGAGCTCACTGAGGATGAGGTGGAACGCGTGATCACTATTATGCAGAATCCACGCCAGTACAAGATCCCA
GACTGGTTCTTGAACAGGCAGAAAGATGTAAAGGATGGAAAGTACAGCCAGGTTCTGGCCAACGGTCTGGACAACAAGCT
GCGTGAAGACCTGGAGAGACTGAAGAAGATACGAGCCCATAGAGGGCTGCGCCACTTCTGGGGCCTTCGGGTCCGAGGCC
AGCACACTAAGACAACTGGCCGTCGGGGCCGTACCGTGGGTGTGTCCAAGAAGAAATAA
ATGTCTCTAGTGATCCCTGAGAAGTTCCAGCACATTTTGCGAGTACTCAATACCAACATCGATGGGCGGCGGAAAATAGC
CTTTGCCATCACTGCCATTAAGGGTGTGGGGCGAAGATATGCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTCACCA
AGCGGGCAGGAGAGCTCACTGAGGATGAGGTGGAACGCGTGATCACTATTATGCAGAATCCACGCCAGTACAAGATCCCA
GACTGGTTCTTGAACAGGCAGAAAGATGTAAAGGATGGAAAGTACAGCCAGGTTCTGGCCAACGGTCTGGACAACAAGCT
GCGTGAAGACCTGGAGAGACTGAAGAAGATACGAGCCCATAGAGGGCTGCGCCACTTCTGGGGCCTTCGGGTCCGAGGCC
AGCACACTAAGACAACTGGCCGTCGGGGCCGTACCGTGGGTGTGTCCAAGAAGAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002648 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021650 | ortholog_one2one | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000012084 | ortholog_one2one | 13 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000010297 | ortholog_one2one | 8 retrogenes | |
| Homo sapiens | ENSG00000231500 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006571 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000032173 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016770 | ortholog_one2one | 11 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007360 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003867 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014210 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010546 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006225 | ortholog_one2one | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000025953 | ortholog_one2one | 14 retrogenes | |
| Pan troglodytes | ENSPTRG00000018039 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000001902 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000028505 | possible_ortholog | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000006857 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000008658 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001502 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004302 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_45 | 82.93 | 53.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_57 | 92.68 | 53.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_205 | 88.16 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_211 | 89.68 | 82.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_234 | 78.36 | 86.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_250 | 88.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tbel_295 | 84.52 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tbel_363 | 85.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tbel_462 | 65.12 | 84.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tbel_578 | 79.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tbel_856 | 76.53 | 63.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tbel_941 | 85.26 | 62.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tbel_1070 | 74.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_tbel_1739 | 83.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_tbel_1745 | 73.63 | 59.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_tbel_1806 | 64.23 | 78.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_tbel_1818 | 56.45 | 79.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_tbel_1827 | 83.87 | 60.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_tbel_1855 | 79.78 | 57.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_tbel_2087 | 73.08 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_tbel_2299 | 65.82 | 50.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_tbel_2309 | 88.37 | 56.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_tbel_2312 | 69.88 | 52.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_tbel_2364 | 86.75 | 99.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_tbel_2424 | 57.14 | 81.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_tbel_2473 | 74.16 | 57.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_tbel_2682 | 72.03 | 74.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_tbel_2768 | 84.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_tbel_3189 | 85.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_tbel_3317 | 95.17 | 94.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_tbel_3383 | 60.14 | 96.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_tbel_3625 | 71.05 | 96.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_tbel_3686 | 64.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_tbel_3731 | 86.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_tbel_3870 | 74.42 | 82.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 36. | retro_tbel_4100 | 64.29 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 37. | retro_tbel_4215 | 82.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 38. | retro_tbel_4365 | 78.31 | 54.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 39. | retro_tbel_4562 | 90.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 40. | retro_tbel_4578 | 92.81 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000012708 retrocopies