RetrogeneDB ID: | retro_tbel_2299 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_108733:31743..31963(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSTBEG00000012708 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 65.82 % |
Parental protein coverage: | 50.66 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LNTNIDGRRKIAFAITAIK-GVGR-RYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWF |
LNTNI.G...IAFA.TAIK.G.G..RYA.V.L..ADI.LTKRAGE.TE.EVERVI.IMQ.PRQ.KI..WF | |
Retrocopy | LNTNINGWKIIAFATTAIK<GCGA<RYARVALSRADI-LTKRAGERTEEEVERVIIIMQRPRQSKI--WF |
Parental | LNRQKDVKD |
L..Q....D | |
Retrocopy | LFCQGEIYD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |