RetrogeneDB ID: | retro_tbel_4365 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_78555:368..617(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSTBEG00000012708 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 78.31 % |
Parental protein coverage: | 54.61 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | RVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRVRGQH |
R...IMQ.PRQY..PDW.LNRQK.VK.G.YSQVLA.G.DN.LREDLERLKKIR..RGL.HFWGLRVRGQH | |
Retrocopy | RGTVIMQTPRQYPLPDWVLNRQKEVKEGQYSQVLASGTDNNLREDLERLKKIRTQRGLCHFWGLRVRGQH |
Parental | TKTTGRRGRTVGV |
TKT.GRRG.TVGV | |
Retrocopy | TKTAGRRGCTVGV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |