RetrogeneDB ID: | retro_meug_1737 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold55845:4824..5157(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSMEUG00000016770 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 58.41 % |
Parental protein coverage: | 74.34 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | RYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLR |
RYAHVVL.KA..DL.KRAGEL.EDEVE..IT..QN..QYKI.DW.L..Q.DVKD.K....LAN.LDNKL. | |
Retrocopy | RYAHVVLSKAETDLKKRAGELSEDEVECAITLVQNSWQYKISDWLLSKQNDVKDEKHR*LLANSLDNKLH |
Parental | EDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGVSKK |
ED.E..KKI.....L...WG....G...KTT...G.T.G.SKK | |
Retrocopy | EDVEKPKKIWV*PRL*YLWGNCIEG--SKTTQCHGPTSGISKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |