RetrogeneDB ID: | retro_tbel_1827 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5843:539321..539596(+) | ||
Located in intron of: | ENSTBEG00000006728 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS18 | ||
Ensembl ID: | ENSTBEG00000012708 | ||
Aliases: | None | ||
Description: | ribosomal protein S18 [Source:HGNC Symbol;Acc:10401] |
Percent Identity: | 83.87 % |
Parental protein coverage: | 60.53 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | EDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLR |
...VE.VITIMQNPRQYKIPDWFLNRQKDVKD.KYSQVLANGLD.KL.EDLERLKKI.AHRGL.HFWGLR | |
Retrocopy | QGDVECVITIMQNPRQYKIPDWFLNRQKDVKDRKYSQVLANGLDSKLHEDLERLKKIQAHRGLNHFWGLR |
Parental | VRGQHTKTTGRRGRTV-GVSKKK |
V.GQHTKT.G..GRT..GVSKKK | |
Retrocopy | V*GQHTKTAGPCGRTM<GVSKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |