Parental gene: | PTP4A1, ENSCJAG00000001743 |
Aliases: | None |
Description: | protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634] |
Organism: | Marmoset (Callithrix jacchus) |
Coordinates: | 4:61914927..61926347(+) |
Library | Parental gene expression (RPM) |
---|---|
SRP051959_spleen | 17 .63 RPM |
SRP051959_skeletal_muscle | 367 .29 RPM |
SRP051959_lymph_node | 17 .01 RPM |
SRP051959_lung | 22 .60 RPM |
SRP051959_liver | 138 .43 RPM |
SRP051959_kidney | 54 .42 RPM |
SRP051959_heart | 22 .36 RPM |
SRP051959_colon | 26 .87 RPM |
Species | Parental gene accession | Homology type | Retrogenes number | |
---|---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002438 | ortholog_one2one | 3 retrogenes | |
Bos taurus | ENSBTAG00000002275 | ortholog_one2one | 3 retrogenes | |
Canis familiaris | ENSCAFG00000002490 | ortholog_one2one | 3 retrogenes | |
Callithrix jacchus | ENSCJAG00000006539 | within_species_paralog | 2 retrogenes | |
Dipodomys ordii | ENSDORG00000009960 | ortholog_one2one | 6 retrogenes | |
Erinaceus europaeus | ENSEEUG00000006477 | ortholog_one2one | 3 retrogenes | |
Echinops telfairi | ENSETEG00000008183 | ortholog_one2one | 6 retrogenes | |
Felis catus | ENSFCAG00000001199 | ortholog_one2one | 3 retrogenes | |
Homo sapiens | ENSG00000112245 | ortholog_one2one | 5 retrogenes | |
Gorilla gorilla | ENSGGOG00000022521 | ortholog_one2one | 7 retrogenes | |
Latimeria chalumnae | ENSLACG00000007183 | ortholog_one2one | 1 retrogene | |
Loxodonta africana | ENSLAFG00000006572 | ortholog_one2one | 8 retrogenes | |
Myotis lucifugus | ENSMLUG00000001162 | ortholog_one2many | 1 retrogene | |
Macaca mulatta | ENSMMUG00000002777 | possible_ortholog | 1 retrogene | |
Monodelphis domestica | ENSMODG00000018701 | ortholog_one2one | 5 retrogenes | |
Mustela putorius furo | ENSMPUG00000003118 | ortholog_one2one | 1 retrogene | |
Mus musculus | ENSMUSG00000026064 | ortholog_one2one | 10 retrogenes | |
Nomascus leucogenys | ENSNLEG00000000440 | ortholog_one2one | 6 retrogenes | |
Oryctolagus cuniculus | ENSOCUG00000006311 | ortholog_one2one | 4 retrogenes | |
Pongo abelii | ENSPPYG00000016743 | ortholog_one2one | 5 retrogenes | |
Pan troglodytes | ENSPTRG00000018314 | ortholog_one2one | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000011771 | ortholog_one2many | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000046370 | ortholog_one2many | 4 retrogenes | |
Tupaia belangeri | ENSTBEG00000009956 | possible_ortholog | 14 retrogenes | |
Tarsius syrichta | ENSTSYG00000004632 | ortholog_one2one | 2 retrogenes | |
Tursiops truncatus | ENSTTRG00000004129 | ortholog_one2one | 6 retrogenes |
# | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
---|---|---|---|---|---|---|
1. | retro_cjac_910 | 79.62 | 90.75 | Please wait, loading | Please wait, loading | Please wait, loading |
2. | retro_cjac_2812 | 83.13 | 95.95 | Please wait, loading | Please wait, loading | Please wait, loading |
3. | retro_cjac_4144 | 64.60 | 65.32 | Please wait, loading | Please wait, loading | Please wait, loading |