RetrogeneDB ID: | retro_mputfur_1587 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897288.1:246083..247344(-) | ||
Located in intron of: | ENSMPUG00000001612 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMPUG00000006441 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.76 % |
Parental protein coverage: | 83.73 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSVRVTQKSYKVSTSGPR-AFSSRSYTSGPGSRISSSAFSRVGGSFRGGLNSSMSVVGGYGGGAGGMGGI |
MSVR.TQKSYKVS.S.PR.A.SSRSYTSGPGSR.SSS.FSRVGGSF.GGLNSSMSVV.GY....GGMGGI | |
Retrocopy | MSVRLTQKSYKVSNSRPR>AVSSRSYTSGPGSRMSSSTFSRVGGSFQGGLNSSMSVVRGY----GGMGGI |
Parental | TAVSVNQSLLSPLKLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLETKWSLLQQQKTAR |
TAVSVNQSLLSPLKL.VDPNIQAVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLETKWSLLQQQKT.R | |
Retrocopy | TAVSVNQSLLSPLKLAVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRHLEQQNKVLETKWSLLQQQKTTR |
Parental | SNIDNMFESYISNLRRQLDTLGQEKLKLEVELGNMQGLVEDFKNKYEEEIKERADMENEFVLIKKDVDEA |
SNIDNMFESYISNL.RQLDTLGQEKL..EVELGNMQGLVEDFKNKYEEEIKERA.MENEFVLIKKDVDEA | |
Retrocopy | SNIDNMFESYISNLQRQLDTLGQEKL--EVELGNMQGLVEDFKNKYEEEIKERAEMENEFVLIKKDVDEA |
Parental | YMNKVELESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDLDGIISEVKAQYEDIANR |
YMNKVELE.RLEGLT..INFLR.LYEE.IRELQSQISDTSVVLSMDNSRSLDLDGIIS.VKAQYEDI.NR | |
Retrocopy | YMNKVELEPRLEGLTNKINFLRRLYEE-IRELQSQISDTSVVLSMDNSRSLDLDGIISKVKAQYEDITNR |
Parental | SRAEAETMYQIKYEELQTLAGKHGDDLRRTKTEISEMNRSISRLQAEIEALKNQRAALEAAIADAEQRGE |
SRAEAETMYQIKYEEL.TLAGKH.DDLRRTKTEISEMNRSISRLQAEIEALKNQRAALEAAIADAEQ.GE | |
Retrocopy | SRAEAETMYQIKYEELLTLAGKHRDDLRRTKTEISEMNRSISRLQAEIEALKNQRAALEAAIADAEQHGE |
Parental | LAIKDANGKVAELEAALQRAKQDMARQLREYQELMNVKLALDIEIATYRKLLEGEESRLESGMQNMSIHT |
LAIKDANGKVAELEAALQRAKQDMARQLREYQ.LMNVKLALDIEIATY.KLLEGEESRLESGMQNMSIHT | |
Retrocopy | LAIKDANGKVAELEAALQRAKQDMARQLREYQ*LMNVKLALDIEIATYCKLLEGEESRLESGMQNMSIHT |
Parental | KTTSGFSG |
KTTSGFSG | |
Retrocopy | KTTSGFSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |