RetrogeneDB ID: | retro_ogar_1162 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873537.1:18163870..18164624(-) | ||
Located in intron of: | ENSOGAG00000002511 | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000033424 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000011740 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.65 % |
Parental protein coverage: | 51.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GAGGMGGITAVT-VNQSLLSPLNLEVDPNIQAVRTQEKEEIKTLNNKFASFIDKVRFLEQQNKMLETKWN |
GA.G.GGITAV..VNQSLL..LNLEVDPNI..V..QEKE.IKTLN.KFASFI.KV.FLEQQNKMLETKWN | |
Retrocopy | GARGGGGITAVI>VNQSLLRLLNLEVDPNIKTVQIQEKEAIKTLN-KFASFINKVHFLEQQNKMLETKWN |
Parental | LLQQQKTARSNMDSMFESYINNLRRQLDTLGQEKLKLEAELGNMQGLVEDFKNKYEEEINKRTEMENEFV |
LLQQQKTARSNMDSMFESYINNL.RQLDTLGQEKLKLEAELGNMQGLV.DFKNKYEEEINK.TE.ENE.V | |
Retrocopy | LLQQQKTARSNMDSMFESYINNLQRQLDTLGQEKLKLEAELGNMQGLV-DFKNKYEEEINKHTELENESV |
Parental | LIKKDVDEAYMNKVELESRLDGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIAEVR |
LIKKDVD.AYMNKVELESRL.GLTDEINFLRQLYEEEI..LQSQISDTSVVLSMDNS.SLDMDSIIAE.. | |
Retrocopy | LIKKDVDDAYMNKVELESRLEGLTDEINFLRQLYEEEIHDLQSQISDTSVVLSMDNSCSLDMDSIIAEAC |
Parental | AQYEEIANRSRAEAESVYLTKYEELQVQAGKHGDDLRRTKTEIS |
AQY.EI.N...A.AES.Y.TKYEELQV.A.KHGDDL..TK.EIS | |
Retrocopy | AQYREITNCRWAKAESMYQTKYEELQVPAEKHGDDLWHTKMEIS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |