RetrogeneDB ID: | retro_nleu_2787 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397430.1:1682593..1683293(-) | ||
Located in intron of: | ENSNLEG00000001118 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT8 | ||
Ensembl ID: | ENSNLEG00000017733 | ||
Aliases: | None | ||
Description: | keratin 8 [Source:HGNC Symbol;Acc:6446] |
Percent Identity: | 74.58 % |
Parental protein coverage: | 58.79 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEKLKLEA |
.I........S.....RFL.QQNKML.TK.SLLQQQK.A.S.MDNM..SYINNL..QL.TLGQEKLKLEA | |
Retrocopy | RIRNRSRPSTSLPPSSRFLKQQNKMLQTK*SLLQQQKMAWSSMDNMSNSYINNLLWQLDTLGQEKLKLEA |
Parental | EL-GNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGL-TDEINFLRQLYEEE |
.L.GNMQGLVEDFKNKYEDEINK.TEMEN..VLIKKD.DEAYMN.VELES.L.G...D.I.FLRQLYEEE | |
Retrocopy | DL<GNMQGLVEDFKNKYEDEINKCTEMENKIVLIKKDADEAYMNRVELESHLDGK<ADKISFLRQLYEEE |
Parental | IRELQSQISDTSVVLSMDNSRSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGDDLR |
IRELQSQI.DTSV.LS..NSRSLDMD.IIAEV.AQYE.IANRS.A.A.SM.QIKYEELQ.L.GKH.DDLR | |
Retrocopy | IRELQSQILDTSVGLSTHNSRSLDMDGIIAEVEAQYEKIANRSQAKADSMHQIKYEELQTLPGKHRDDLR |
Parental | RTKTEISEMNRNISRLQAEIEGLKGQ |
.TKTEIS..N.NISRL..E.EGLKGQ | |
Retrocopy | CTKTEISKINQNISRLHSETEGLKGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |