Parental gene:

KRT8, ENSG00000170421

Aliases:KRT8, CARD2, CK-8, CK8, CYK8, K2C8, K8, KO
Description:keratin 8 [Source:HGNC Symbol;Acc:6446]
Organism:Human (Homo sapiens)
Coordinates:12:53290976..53343738(-)


>ENSG00000170421
ATGAATGGGGTGAGCTGGAGCCAGGACCTGCAGGAAGGGATCTCCGCCTGGTTCGGCCCGCCTGCCTCCACTCCTGCCTC
TACCATGTCCATCAGGGTGACCCAGAAGTCCTACAAGGTGTCCACCTCTGGCCCCCGGGCCTTCAGCAGCCGCTCCTACA
CGAGTGGGCCCGGTTCCCGCATCAGCTCCTCGAGCTTCTCCCGAGTGGGCAGCAGCAACTTTCGCGGTGGCCTGGGCGGC
GGCTATGGTGGGGCCAGCGGCATGGGAGGCATCACCGCAGTTACGGTCAACCAGAGCCTGCTGAGCCCCCTTGTCCTGGA
GGTGGACCCCAACATCCAGGCCGTGCGCACCCAGGAGAAGGAGCAGATCAAGACCCTCAACAACAAGTTTGCCTCCTTCA
TAGACAAGGTACGGTTCCTGGAGCAGCAGAACAAGATGCTGGAGACCAAGTGGAGCCTCCTGCAGCAGCAGAAGACGGCT
CGAAGCAACATGGACAACATGTTCGAGAGCTACATCAACAACCTTAGGCGGCAGCTGGAGACTCTGGGCCAGGAGAAGCT
GAAGCTGGAGGCGGAGCTTGGCAACATGCAGGGGCTGGTGGAGGACTTCAAGAACAAGTATGAGGATGAGATCAATAAGC
GTACAGAGATGGAGAACGAATTTGTCCTCATCAAGAAGGATGTGGATGAAGCTTACATGAACAAGGTAGAGCTGGAGTCT
CGCCTGGAAGGGCTGACCGACGAGATCAACTTCCTCAGGCAGCTATATGAAGAGGAGATCCGGGAGCTGCAGTCCCAGAT
CTCGGACACATCTGTGGTGCTGTCCATGGACAACAGCCGCTCCCTGGACATGGACAGCATCATTGCTGAGGTCAAGGCAC
AGTACGAGGATATTGCCAACCGCAGCCGGGCTGAGGCTGAGAGCATGTACCAGATCAAGTATGAGGAGCTGCAGAGCCTG
GCTGGGAAGCACGGGGATGACCTGCGGCGCACAAAGACTGAGATCTCTGAGATGAACCGGAACATCAGCCGGCTCCAGGC
TGAGATTGAGGGCCTCAAAGGCCAGAGGGCTTCCCTGGAGGCCGCCATTGCAGATGCCGAGCAGCGTGGAGAGCTGGCCA
TTAAGGATGCCAACGCCAAGTTGTCCGAGCTGGAGGCCGCCCTGCAGCGGGCCAAGCAGGACATGGCGCGGCAGCTGCGT
GAGTACCAGGAGCTGATGAACGTCAAGCTGGCCCTGGACATCGAGATCGCCACCTACAGGAAGCTGCTGGAGGGCGAGGA
GAGCCGGCTGGAGTCTGGGATGCAGAACATGAGTATTCATACGAAGACCACCAGCGGCTATGCAGGTGGTCTGAGCTCGG
CCTATGGGGGCCTCACAAGCCCCGGCCTCAGCTACAGCCTGGGCTCCAGCTTTGGCTCTGGCGCGGGCTCCAGCTCCTTC
AGCCGCACCAGCTCCTCCAGGGCCGTGGTTGTGAAGAAGATCGAGACACGTGATGGGAAGCTGGTGTCTGAGTCCTCTGA
CGTCCTGCCCAAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 168 .59 RPM
bodymap2_lung 176 .67 RPM
bodymap2_breast 56 .07 RPM
bodymap2_adipose 6 .86 RPM
bodymap2_adrenal 4 .42 RPM
bodymap2_skeletal_muscle 0 .11 RPM
bodymap2_thyroid 375 .21 RPM
bodymap2_prostate 95 .50 RPM
bodymap2_colon 132 .45 RPM
bodymap2_testis 29 .77 RPM
bodymap2_brain 0 .56 RPM
bodymap2_heart 32 .09 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 8 .63 RPM
bodymap2_ovary 45 .99 RPM
bodymap2_kidney 197 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007199 ortholog_one2many 2 retrogenes
retro_cfam_1036, retro_cfam_1590,
Callithrix jacchus ENSCJAG00000018147 possible_ortholog 3 retrogenes
retro_cjac_124, retro_cjac_167, retro_cjac_216,
Cavia porcellus ENSCPOG00000002615 ortholog_one2many 5 retrogenes
retro_cpor_1269, retro_cpor_1459, retro_cpor_233, retro_cpor_302, retro_cpor_516,
Dasypus novemcinctus ENSDNOG00000007400 ortholog_one2one 3 retrogenes
retro_dnov_1267, retro_dnov_1886, retro_dnov_2358,
Felis catus ENSFCAG00000000298 ortholog_one2many 2 retrogenes
retro_fcat_1142, retro_fcat_891,
Gorilla gorilla ENSGGOG00000014673 ortholog_one2one 18 retrogenes
retro_ggor_1160, retro_ggor_1787, retro_ggor_1862, retro_ggor_1897, retro_ggor_1900, retro_ggor_2320, retro_ggor_2662, retro_ggor_2913, retro_ggor_2918, retro_ggor_297, retro_ggor_2975, retro_ggor_382, retro_ggor_564, retro_ggor_66, retro_ggor_691, retro_ggor_751, retro_ggor_803, retro_ggor_809,
Macaca mulatta ENSMMUG00000002163 ortholog_one2many 22 retrogenes
retro_mmul_1069, retro_mmul_1122, retro_mmul_1178, retro_mmul_1349, retro_mmul_1351, retro_mmul_1412, retro_mmul_1697, retro_mmul_1753, retro_mmul_1810, retro_mmul_1855, retro_mmul_1866, retro_mmul_2097, retro_mmul_2137, retro_mmul_2357, retro_mmul_2431, retro_mmul_2546, retro_mmul_289, retro_mmul_488, retro_mmul_58, retro_mmul_766, retro_mmul_816, retro_mmul_886,
Mustela putorius furo ENSMPUG00000006441 ortholog_one2many 7 retrogenes
retro_mputfur_1101, retro_mputfur_1208, retro_mputfur_1271, retro_mputfur_1557, retro_mputfur_1587, retro_mputfur_556, retro_mputfur_895,
Mus musculus ENSMUSG00000049382 ortholog_one2one 1 retrogene
retro_mmus_2905,
Nomascus leucogenys ENSNLEG00000017733 ortholog_one2one 8 retrogenes
retro_nleu_1913, retro_nleu_225, retro_nleu_2285, retro_nleu_2421, retro_nleu_2485, retro_nleu_2727, retro_nleu_2787, retro_nleu_672,
Oryctolagus cuniculus ENSOCUG00000006945 ortholog_one2one 1 retrogene
retro_ocun_313,
Otolemur garnettii ENSOGAG00000011740 ortholog_one2many 16 retrogenes
retro_ogar_1076, retro_ogar_1162, retro_ogar_1256, retro_ogar_1572, retro_ogar_1874, retro_ogar_1898, retro_ogar_1952, retro_ogar_2004, retro_ogar_2149, retro_ogar_2177, retro_ogar_2261, retro_ogar_2500, retro_ogar_3198, retro_ogar_3318, retro_ogar_339, retro_ogar_664,
Pongo abelii ENSPPYG00000004562 ortholog_one2one 31 retrogenes
retro_pabe_1102, retro_pabe_1261, retro_pabe_1289, retro_pabe_1460, retro_pabe_1743, retro_pabe_2063, retro_pabe_2077, retro_pabe_2129, retro_pabe_2142, retro_pabe_2214, retro_pabe_2270, retro_pabe_2352, retro_pabe_2544, retro_pabe_2741, retro_pabe_2763, retro_pabe_2787, retro_pabe_2842, retro_pabe_2926, retro_pabe_2943, retro_pabe_3138, retro_pabe_332, retro_pabe_3439, retro_pabe_3644, retro_pabe_3716, retro_pabe_417, retro_pabe_460, retro_pabe_569, retro_pabe_605, retro_pabe_701, retro_pabe_803, retro_pabe_851,
Pteropus vampyrus ENSPVAG00000009360 ortholog_one2one 3 retrogenes
retro_pvam_1299, retro_pvam_1396, retro_pvam_45,
Rattus norvegicus ENSRNOG00000009779 ortholog_one2one 1 retrogene
retro_rnor_807,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_169 77.69 97.65
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2. retro_hsap_235 84.54 97.26
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3. retro_hsap_371 85.86 77.10
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4. retro_hsap_644 84.35 77.85
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5. retro_hsap_844 86.46 86.11
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6. retro_hsap_932 88.60 97.65
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7. retro_hsap_1012 82.29 82.61
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8. retro_hsap_1024 82.49 57.93
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9. retro_hsap_1324 84.17 53.62
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10. retro_hsap_1513 84.33 97.65
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11. retro_hsap_1557 85.17 97.26
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12. retro_hsap_1599 82.24 97.46
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13. retro_hsap_1708 84.18 57.53
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14. retro_hsap_2354 86.63 97.65
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15. retro_hsap_2669 80.09 82.19
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16. retro_hsap_2731 87.60 97.65
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17. retro_hsap_2768 82.00 97.65
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18. retro_hsap_2797 85.59 68.32
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19. retro_hsap_2842 87.11 67.71
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20. retro_hsap_3069 83.26 89.63
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21. retro_hsap_3359 86.82 82.39
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22. retro_hsap_3379 91.96 89.43
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23. retro_hsap_3433 78.38 57.73
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24. retro_hsap_3963 95.18 97.46
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25. retro_hsap_4203 84.97 97.65
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26. retro_hsap_4688 83.80 97.65
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27. retro_hsap_4691 68.33 70.60
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28. retro_hsap_4775 86.56 62.43
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Download FASTA sequences of all ENSG00000170421 retrocopies