RetrogeneDB ID: | retro_nleu_1913 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397315.1:3591643..3592314(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT8 | ||
Ensembl ID: | ENSNLEG00000017733 | ||
Aliases: | None | ||
Description: | keratin 8 [Source:HGNC Symbol;Acc:6446] |
Percent Identity: | 71.93 % |
Parental protein coverage: | 56.53 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | TQEKEQIKTLNNKFASFIDKVR-FLEQQNKMLET-KWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQ |
T.EK.QI.TLNN.FA.FIDK....LEQQ.KML.T..WSLLQQQKTA.SNMD.M.ES..NNL.RQ..TLGQ | |
Retrocopy | TLEKGQINTLNN-FAFFIDKIY<LLEQQQKMLKT<QWSLLQQQKTAQSNMDDMLESHVNNLWRQWDTLGQ |
Parental | EKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDV-DEAYMNKVELESRLEGLTDEINFLR |
EKLKLE.ELGNMQGL..D..NKYE..INK.TE..N.FVLIKKDV..E...NKVELES.LEGLTDEINFLR | |
Retrocopy | EKLKLETELGNMQGLLKDLNNKYEGDINKQTEI*NVFVLIKKDV>NETCINKVELESLLEGLTDEINFLR |
Parental | QLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGK |
Q.Y.E.I.EL.SQIS.TSVVLSMDNS.SL.MDSIIAEVK.QYE.I.N.S.A.AE.MYQIKYEELQ.LA.K | |
Retrocopy | QMYKEDICELHSQISYTSVVLSMDNSHSLEMDSIIAEVKTQYEEITNHSLAKAERMYQIKYEELQMLAEK |
Parental | HGDDLRRTKTEISEMNRN |
HGD.L..TK....EM..N | |
Retrocopy | HGDELCHTKMDVAEMSCN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |