RetrogeneDB ID: | retro_ogar_1256 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873540.1:11743806..11744849(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000011740 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.86 % |
Parental protein coverage: | 71.08 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | SSSSFSRVGSGSFRSGLSTGLGLGGGYAGAGGMGGITAVTVNQSLLSPLNLEVDPNIQAVRTQEKEEIKT |
S.SSFS.VGSGSF.SGL.TGLGLGGGY.GAGGMGGIT.VTVNQSLLSPLNLEVDPNIQAV.TQEKEEIKT | |
Retrocopy | SFSSFSLVGSGSFGSGLGTGLGLGGGYNGAGGMGGITDVTVNQSLLSPLNLEVDPNIQAVCTQEKEEIKT |
Parental | LNNKFASFIDKVRFLEQQNKMLETKWNLLQQQKTARSNMDSMFESYINNLRRQLDTLGQEKLKLEAELGN |
LNNKFASFIDKVRFLEQQNKM.ETKWNLLQQQKTA.SNMDS..ES.INNL..QLDTLGQEKLKLEAELGN | |
Retrocopy | LNNKFASFIDKVRFLEQQNKMQETKWNLLQQQKTAHSNMDSLCESCINNLP*QLDTLGQEKLKLEAELGN |
Parental | MQGLVEDFKNKYEEEINKRTEMENEFVLIKKDVDEA-YMNKVELESRLDGLTDEINFLRQLYEEEIRELQ |
MQGLVEDFKNKYEEE.NK.TEMENEFVLI..DVDEA.YMNKV.LES.L.GLTD.INFLR.LYEEE..ELQ | |
Retrocopy | MQGLVEDFKNKYEEETNKHTEMENEFVLI-EDVDEA<YMNKVDLESCLEGLTDKINFLR*LYEEEPCELQ |
Parental | SQISDTSVVLSMDNSRSLDMDSIIAEVRAQYEEIANRSRAEAESVYLTKYEELQVQAGKHGDDLRRTKTE |
SQISDTSVVLSMDNS.SLDMDSIIAEV.AQYEEIAN.SRAEAESVY.TKYEELQVQAGK.GDDLRR.K.E | |
Retrocopy | SQISDTSVVLSMDNSCSLDMDSIIAEVHAQYEEIANHSRAEAESVYRTKYEELQVQAGKQGDDLRRMKME |
Parental | ISDMNRNISRLQNEIEALKGQRAALEASIADAEQRGELALKDANAKLAQLEAALRQAKQDMAQQLREYQD |
IS.MN.NIS.LQNEI.ALKGQRAA.EASI..AEQ.GEL.LKDANAKLAQLE.AL.QAKQDMAQQ..EYQD | |
Retrocopy | ISNMNQNISQLQNEIKALKGQRAAPEASIVHAEQHGELVLKDANAKLAQLETALSQAKQDMAQQPCEYQD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |