RetrogeneDB ID: | retro_nleu_2285 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397341.1:9045988..9046755(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT8 | ||
Ensembl ID: | ENSNLEG00000017733 | ||
Aliases: | None | ||
Description: | keratin 8 [Source:HGNC Symbol;Acc:6446] |
Percent Identity: | 79.07 % |
Parental protein coverage: | 64.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | TQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEK |
TQEKEQIKTL..KF.S.IDKVRFL.QQ.KMLE.KWSLLQQQ..A.SNM..MFESYINNLRRQLETLGQEK | |
Retrocopy | TQEKEQIKTLA-KFVSVIDKVRFLGQQIKMLEPKWSLLQQQEMAQSNMGDMFESYINNLRRQLETLGQEK |
Parental | LKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQLY |
LKLE.ELGNMQGLVEDFKN..EDEINK..EM.NEFVLIKKDVDEAYMN.VELESRL.GL..EINFLR.L. | |
Retrocopy | LKLETELGNMQGLVEDFKNENEDEINKGKEMANEFVLIKKDVDEAYMNRVELESRLDGLSNEINFLRELH |
Parental | EEEIRELQSQISDTSVVLSMDNS-RSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHG |
EEEIREL.SQISDTSVVL.MDNS..SLDM.SIIAEVK.QYE.IANRS.AEAES.YQ.KYEELQ.LA.KHG | |
Retrocopy | EEEIRELHSQISDTSVVLFMDNS<PSLDMESIIAEVKVQYEEIANRSLAEAESIYQVKYEELQMLAAKHG |
Parental | DDLRRTKTEISEMNRNISRLQAEIEGLKGQLRDAGKVPWARTEVKGGW |
DDLRRTKTEISEM.RNIS.LQAEI.GLKGQ.......P.......G.W | |
Retrocopy | DDLRRTKTEISEMKRNISWLQAEIDGLKGQMASLWRSPSHMPSSVGSW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |