RetrogeneDB ID: | retro_ogar_1572 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873551.1:18185613..18186794(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000029371 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000011740 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.75 % |
Parental protein coverage: | 81.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SIRVTQKSYKVSTSAPRAFSSRSYSSGPGARISSSSFSRVGSGSFRSGLSTGLGLGGGYAGAGGMGGITA |
S.RVTQKSY.VSTS.P.AFSSRSYSS...A.I.S.SFSRVGSGSFRSGL.TG.GLGGGYAGAGGMGGITA | |
Retrocopy | SFRVTQKSYSVSTSTPPAFSSRSYSSRARACIRSLSFSRVGSGSFRSGLGTGPGLGGGYAGAGGMGGITA |
Parental | VTVNQSLLSPLNLEVDPNIQAVRTQEKEEIKTLNNKFASFIDKVRFLEQQNKMLETKWNLLQQQKTARSN |
VTVNQSLLSPLNLEVDPNIQAVR.QEKE.IKTLNN.FASFIDKVRFLEQQNK.LETKWNLLQQQKTA.SN | |
Retrocopy | VTVNQSLLSPLNLEVDPNIQAVRPQEKEVIKTLNNQFASFIDKVRFLEQQNKRLETKWNLLQQQKTAGSN |
Parental | MDSMFESYINNLRRQLDTLGQEKLKLEAELGNMQGLVEDFKNKYEEEINKRTEMENEFVLIKKDVDEAYM |
MDSMFESYINN.RRQLDTLGQEKLKLEAELGNMQGLVEDF..KYEEEINK.TEMENEFVL.KKDVD.AY. | |
Retrocopy | MDSMFESYINNPRRQLDTLGQEKLKLEAELGNMQGLVEDFRSKYEEEINKPTEMENEFVLLKKDVDKAYV |
Parental | NKVELESRLDGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIAEVRAQYEEIANRSR |
NK..LE.RLD.LT.EI.FLR.LY..EI..L.S.ISDTSV....D...SLDMDSIIAEV..QYE.I.NRS. | |
Retrocopy | NKLNLEFRLDRLTEEIDFLRRLY-NEIHGLPSLISDTSV----DSTHSLDMDSIIAEVSTQYEKITNRSG |
Parental | AEAESVYLTKYEELQVQAGKHGDDLRRTKTEISDMNRNISRLQNEIEALKGQRAALEASIADAEQRGELA |
AEAES.Y.TKYEELQ.QAGKHGDDLRRTKTEISDMNRNISRLQN.I.AL.GQRAALEASI.DAEQRGELA | |
Retrocopy | AEAESKYQTKYEELQMQAGKHGDDLRRTKTEISDMNRNISRLQNGIKALEGQRAALEASITDAEQRGELA |
Parental | LKDANAKL-AQLEAALRQAKQDMAQQLREYQDLMNVKLALDVEIATYRKL |
LKDAN.KL.AQLEAA..QA.QDMAQQLR.YQDLMNVKLALD.EIATY..L | |
Retrocopy | LKDANTKL<AQLEAAVCQATQDMAQQLRVYQDLMNVKLALDMEIATYLQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |