RetrogeneDB ID: | retro_chof_1484 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_304620:983..1403(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSCHOG00000008721 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 90. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
MGR.HAPGKGLSQSALPY..S.PTWLKLTSDDVKEQIYKLAKKGLT.S.IGVILRDSHGVAQV.FVTGNK | |
Retrocopy | MGRVHAPGKGLSQSALPYCHSIPTWLKLTSDDVKEQIYKLAKKGLTLSKIGVILRDSHGVAQVCFVTGNK |
Parental | ILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWK |
ILRILKSKGLAPDLPEDLYH.IKKAVAVRKH.ERNRKDKDAKFRLILIES.IHRLA.YYKTK..L.PNWK | |
Retrocopy | ILRILKSKGLAPDLPEDLYHPIKKAVAVRKHFERNRKDKDAKFRLILIES*IHRLA*YYKTKLILTPNWK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |