RetrogeneDB ID: | retro_chof_1497 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_30844:9389..9810(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSCHOG00000008721 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 90.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGR-MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGN |
MGR.MHAPGKGLSQSALPYR.SVPTWL.LTSDDVKE.IYKLAKKGLTPSQ.GVILRDSHGVAQV.FVTGN | |
Retrocopy | MGR>MHAPGKGLSQSALPYRHSVPTWLNLTSDDVKELIYKLAKKGLTPSQVGVILRDSHGVAQVCFVTGN |
Parental | KILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNW |
KILRILKSKGLAPDLPED.YHLIKKAVAV.KHLERNRKDKDAKF.LILIES.IHRLARYYKTK.VLP..W | |
Retrocopy | KILRILKSKGLAPDLPEDIYHLIKKAVAVQKHLERNRKDKDAKFSLILIESQIHRLARYYKTKQVLPSSW |
Parental | K |
K | |
Retrocopy | K |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |