RetrogeneDB ID: | retro_mmur_880 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_118310:978..1348(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSMICG00000003716 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 75.97 % |
Parental protein coverage: | 82.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | GKGLSQ-SALPYRRS-VPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDS-HGVAQVRFVTGNKILRI |
G.GLSQ..A.P.RRS..P.WL.L.S.DVKE..YKLAKKG..PSQ.GVI.RD...G.AQV.FVT.NKILRI | |
Retrocopy | GEGLSQ<VASPHRRS<LPAWLWLVSEDVKE-VYKLAKKGRAPSQMGVIPRDH<QGAAQVYFVTRNKILRI |
Parental | LKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARY-YKTK |
LKSKGLAPDLPE.LYHLIK.AVAVRKHLERNRKDKDA.F.LIL.ESRIHRLA...YKTK | |
Retrocopy | LKSKGLAPDLPEALYHLIKNAVAVRKHLERNRKDKDAEFHLILTESRIHRLAHL>YKTK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |