RetrogeneDB ID: | retro_ggor_127 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 1:54453695..54454151(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000024760 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSGGOG00000007450 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.03 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
MGRMHAPGK.LSQSALPYRRSVPTWLKLTSD.VKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK | |
Retrocopy | MGRMHAPGKSLSQSALPYRRSVPTWLKLTSDNVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
Parental | ILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWK |
ILRILKSKGLAPDLPEDLYHLIKKAV.V.KHLERNRKDKDAKF.LILIES.IHRLARYYKTKRVLPPNWK | |
Retrocopy | ILRILKSKGLAPDLPEDLYHLIKKAVDVQKHLERNRKDKDAKFHLILIESWIHRLARYYKTKRVLPPNWK |
Parental | YESSTASALVA |
YESSTASALVA | |
Retrocopy | YESSTASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .29 RPM | 38 .94 RPM |
SRP007412_cerebellum | 0 .83 RPM | 62 .45 RPM |
SRP007412_heart | 0 .13 RPM | 30 .08 RPM |
SRP007412_kidney | 0 .90 RPM | 150 .39 RPM |
SRP007412_liver | 0 .58 RPM | 148 .90 RPM |
SRP007412_testis | 1 .24 RPM | 111 .47 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_388 |