RetrogeneDB ID: | retro_meug_635 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold14949:14081..14480(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSMEUG00000014986 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 78.2 % |
Parental protein coverage: | 88. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKS-LTPSQIGVILRDSHGVAQVRFVTGNK |
MG.MH.PGKGLSQSALPY..SVPTWLKLTS.DVKEQIYKL.K..L.P.QI.VILRDSHGVAQV.FVTGNK | |
Retrocopy | MGCMHTPGKGLSQSALPYHHSVPTWLKLTSNDVKEQIYKLVKKGLMPFQIHVILRDSHGVAQVCFVTGNK |
Parental | ILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDSKFRLILNESRIHRLARYYKTKR |
ILRILK.KGL.P..PEDL.HLIKKAVA..KHL.RNRKDKDSKF.LILN.SRIH.LA......R | |
Retrocopy | ILRILKFKGLVPAIPEDLCHLIKKAVALQKHLARNRKDKDSKFHLILNKSRIH*LAQQQDEER |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |