RetrogeneDB ID: | retro_pvam_698 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_821:28807..29219(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSPVAG00000012806 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 82.61 % |
Parental protein coverage: | 89.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | PYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK-ILRILKSKGLAPDLP |
PYR.SVPTWLKLT.D..KEQ..KL.KKGLTPSQIGVILRDSHGV.QVRFVTGNK.IL.ILKSKGL.PDL. | |
Retrocopy | PYRHSVPTWLKLTNDNMKEQLHKLGKKGLTPSQIGVILRDSHGVVQVRFVTGNK>IL*ILKSKGLVPDLS |
Parental | EDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVL--PPNWKYESSTASALVA |
EDLYHLIKKAVAVRKHLERNRKDK..KF.LILIES.IHRLAR.YKTK.VL..PP.WKY.S..ASALVA | |
Retrocopy | EDLYHLIKKAVAVRKHLERNRKDKSTKFHLILIESLIHRLARDYKTKQVLPPPPHWKYKSFAASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |