RetrogeneDB ID: | retro_vpac_247 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_3300:3223622..3223804(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSVPAG00000001463 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 79.03 % |
Parental protein coverage: | 61. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPP-NWKYESSTASALVA |
LIK...AV.KHLERNRKDKD.K..LILIES.IH.LARYYKTK.VLP..NWKY.SSTASALVA | |
Retrocopy | LIKLNDAVQKHLERNRKDKDTKLYLILIESHIHQLARYYKTKQVLPT<NWKYKSSTASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |