RetrogeneDB ID: | retro_vpac_117 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_1907:2377..2677(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSVPAG00000001463 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 100. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VILRDSHGVAQVRFVTGNKILRILKSRGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESR |
VILRDSHGVAQVRFVTGNKILRILKSRGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESR | |
Retrocopy | VILRDSHGVAQVRFVTGNKILRILKSRGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESR |
Parental | IHRLARYYKTKRVLPPNWKYESSTASALVA |
IHRLARYYKTKRVLPPNWKYESSTASALVA | |
Retrocopy | IHRLARYYKTKRVLPPNWKYESSTASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |