Parental gene:

RPS13, ENSLAFG00000026881

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_21:32431658..32435132(+)


>ENSLAFG00000026881
ATGGGTCGCATGCATGCTCCCGGGAAGGGCCTGTCCCAGTCGGCTCTGCCCTACCGCCGCAGCGTCCCCACCTGGCTGAA
GTTGACGTCTGACGACGTGAAGGAGCAGATCTACAAATTGGCCAAGAAGGGCCTGACGCCTTCACAAATTGGTGTGATCC
TAAGAGATTCGCATGGCGTTGCACAAGTACGTTTTGTGACAGGCAATAAAATCTTGAGAATCCTTAAGTCCAAAGGACTA
GCTCCTGATCTTCCTGAGGATCTCTACCATTTAATTAAGAAAGCTGTTGCTGTTCGAAAGCATCTTGAGAGGAACAGAAA
GGATAAGGATGCTAAATTCCGTCTGATTCTAATCGAGAGCCGAATTCACCGGTTGGCTCGATACTATAAGACGAAGAGAG
TCCTTCCCCCTAATTGGAAGTATGAATCATCCACAGCCTCTGCCCTGGTTGCATAA

Species Parental gene accession Homology type Retrogenes number
Caenorhabditis elegans C16A3.9 ortholog_one2one 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000002895 ortholog_one2one 3 retrogenes
Bos taurus ENSBTAG00000040308 ortholog_one2many 5 retrogenes
Choloepus hoffmanni ENSCHOG00000008721 ortholog_one2one 4 retrogenes
Callithrix jacchus ENSCJAG00000009564 ortholog_one2many 1 retrogene
Cavia porcellus ENSCPOG00000000023 ortholog_one2one 3 retrogenes
Dipodomys ordii ENSDORG00000002507 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000014928 ortholog_one2one 12 retrogenes
Felis catus ENSFCAG00000005370 ortholog_one2many 2 retrogenes
Homo sapiens ENSG00000110700 ortholog_one2one 6 retrogenes
Gorilla gorilla ENSGGOG00000007450 ortholog_one2many 3 retrogenes
Latimeria chalumnae ENSLACG00000017174 ortholog_one2many 1 retrogene
Macropus eugenii ENSMEUG00000014986 ortholog_one2one 2 retrogenes
Microcebus murinus ENSMICG00000003716 ortholog_one2one 8 retrogenes
Myotis lucifugus ENSMLUG00000009751 ortholog_one2many 3 retrogenes
Macaca mulatta ENSMMUG00000022547 ortholog_one2many 2 retrogenes
Monodelphis domestica ENSMODG00000007078 ortholog_one2one 6 retrogenes
Mustela putorius furo ENSMPUG00000013316 ortholog_one2many 1 retrogene
Mus musculus ENSMUSG00000090862 ortholog_one2one 19 retrogenes
Nomascus leucogenys ENSNLEG00000026739 ortholog_one2one 4 retrogenes
Ornithorhynchus anatinus ENSOANG00000007687 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000005536 ortholog_one2one 6 retrogenes
Otolemur garnettii ENSOGAG00000002128 ortholog_one2one 7 retrogenes
Ochotona princeps ENSOPRG00000000162 ortholog_one2one 5 retrogenes
Pongo abelii ENSPPYG00000003456 ortholog_one2one 6 retrogenes
Pteropus vampyrus ENSPVAG00000012806 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000020502 ortholog_one2many 2 retrogenes
Sarcophilus harrisii ENSSHAG00000004052 ortholog_one2one 3 retrogenes
Sus scrofa ENSSSCG00000013381 ortholog_one2many 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000008996 ortholog_one2one 5 retrogenes
Tupaia belangeri ENSTBEG00000007717 ortholog_one2one 7 retrogenes
Tarsius syrichta ENSTSYG00000013114 ortholog_one2one 11 retrogenes
Tursiops truncatus ENSTTRG00000016321 ortholog_one2one 3 retrogenes
Vicugna pacos ENSVPAG00000001463 ortholog_one2one 5 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_382 69.68 100.00
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2. retro_lafr_511 80.13 100.00
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3. retro_lafr_1179 80.62 82.78
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Download FASTA sequences of all ENSLAFG00000026881 retrocopies