RetrogeneDB ID: | retro_tsyr_1967 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_73220:4053..4505(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSTSYG00000013114 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 72.37 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLNLTSDDVNEHIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
M..MH.PGKGL.QS.LP....VPTWL..TSD.V...IYKLAKK.LTPSQ.GV.LRDSHG..Q.RFVTGN. | |
Retrocopy | MDHMHTPGKGLFQSVLPHHHGVPTWLKMTSDGVKQQIYKLAKKDLTPSQTGVPLRDSHGIVQARFVTGNN |
Parental | ILRILKSKGLAPDL-PEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKIKRVLPPNW |
ILRI.KSKG.A.DL..EDLYHLIKK.VA..KHLERNRKDKD.KF.LILI.SRIH.L..Y.K.K.VL.P.. | |
Retrocopy | ILRIFKSKGPALDL<SEDLYHLIKKVVAAQKHLERNRKDKDDKFHLILIDSRIH*LSQYFKTKQVLSPSC |
Parental | KYESSTASALVA |
KYESSTASALVA | |
Retrocopy | KYESSTASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |