RetrogeneDB ID: | retro_mmur_460 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_3259:298716..299165(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSMICG00000003716 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 85.06 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
MGRMHAPGKGLSQ.ALPY..SVPTWL.L.SDDVKEQIY.LA.KGLTPSQIGVILRDSHGVAQVRFVTGNK | |
Retrocopy | MGRMHAPGKGLSQLALPYSSSVPTWLNLMSDDVKEQIYTLA-KGLTPSQIGVILRDSHGVAQVRFVTGNK |
Parental | ILRILKSKGLAPDLPEDLYHL-IKKAVAVRKHLERNRKDKDAKFRLILIESR-IHRLARY-YKTKRVLPP |
ILRILKSKGL.PDLPEDLY.L.IKK.VAV.K.LERNRKDKDAKFRLILIESR.I.RLA.Y..K.K..LPP | |
Retrocopy | ILRILKSKGLSPDLPEDLYRL>IKKVVAV*KRLERNRKDKDAKFRLILIESR<IPRLAQY<LKAK*DLPP |
Parental | NWKYESSTASALVA |
.WKYESST.SALVA | |
Retrocopy | TWKYESSTSSALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |