RetrogeneDB ID: | retro_tsyr_51 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_1328:35669..35975(+) | ||
Located in intron of: | ENSTSYG00000004135 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSTSYG00000013114 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 75.47 % |
Parental protein coverage: | 70.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MGRMHAPGKGLSQSALPYRRSVPTWLNLTSDDVNEHIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNK |
MG.MHAPGKG......P.....PT.L.L.SD.V.E.IY.LAKKGLTPS.IGVILRDSHGVAQVR.VTGNK | |
Retrocopy | MGNMHAPGKGCPNWSCP----IPT*LKLMSDNVKEQIYNLAKKGLTPS*IGVILRDSHGVAQVRLVTGNK |
Parental | ILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNR |
ILRILKSKGLAPDLPE.LY.LIKKAV..RKHL.RNR | |
Retrocopy | ILRILKSKGLAPDLPEGLYYLIKKAVPARKHLGRNR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |