RetrogeneDB ID: | retro_ogar_1595 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873554.1:13716939..13717300(+) | ||
Located in intron of: | ENSOGAG00000002662 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSOGAG00000002128 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 73.39 % |
Parental protein coverage: | 79.08 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | DDVKEQIYKLAK-KGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDL-YHLIKKAVAV |
DD...QIYKLAK.KGL.PSQIG.ILRDS...AQ.R..TGNKILRIL.SKGL.PDLPE.L..H.IKKAVAV | |
Retrocopy | DDMQGQIYKLAK<KGLSPSQIGMILRDSYDIAQGRLITGNKILRILTSKGLTPDLPECL<HHSIKKAVAV |
Parental | RKHLERNRKDKDAKFRLILIESRIHRLA-RYYKTKRVLPPNWKYESSTASALVA |
.KH.ERNRK..DAK..LILIESRIH.LA..YYKTK.VLPP.WK..SS.AS.LVA | |
Retrocopy | *KHPERNRKE-DAKLHLILIESRIHGLAWCYYKTKQVLPPTWK*ASSMASDLVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |