RetrogeneDB ID: | retro_tsyr_1900 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_64772:8330..8708(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS13 | ||
Ensembl ID: | ENSTSYG00000013114 | ||
Aliases: | None | ||
Description: | ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] |
Percent Identity: | 82.54 % |
Parental protein coverage: | 83.44 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | LNLTSDDVNEHIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKA |
..LTSD.V.E.IYKLA.KG.TPSQIGVILR.SHGVAQV..VTGNKILRI.KSKG.APD.PEDLYHLIKKA | |
Retrocopy | IQLTSDHVKE*IYKLARKGRTPSQIGVILRVSHGVAQVCYVTGNKILRIPKSKGIAPDFPEDLYHLIKKA |
Parental | VAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKIKRVLPPNWKYESSTASALVA |
VAVRKHLERNRKDKDAKFRLIL.ES.IH.LARY.K.K.VLP..WKYE.STASALVA | |
Retrocopy | VAVRKHLERNRKDKDAKFRLILTESQIH*LARYCKTK*VLPFSWKYELSTASALVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |