RetrogeneDB ID: | retro_chof_1785 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_384039:811..1128(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSCHOG00000007477 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 74.07 % |
Parental protein coverage: | 84.68 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTS |
KKLVAKGG...KQVLKFT..CTHPVEDGI.DAANF.QFLQERIKVNGKAGNLGGGV.T.ERSKSKITVTS | |
Retrocopy | KKLVAKGGXXXKQVLKFTVNCTHPVEDGILDAANF*QFLQERIKVNGKAGNLGGGVITVERSKSKITVTS |
Parental | EV--PFSKRYLKYLTKKYLKKNNLRDW-LRVVANSKES |
EV...FSKRYL.YL.K.Y.....L.DW....VAN.K.. | |
Retrocopy | EVTNTFSKRYLRYL-K*Y*SQLYLCDW<VCIVANNKKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |