Parental gene:

RPL22, ENSTBEG00000009172

Aliases:None
Description:ribosomal protein L22 [Source:HGNC Symbol;Acc:10315]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2260:386104..398792(-)


>ENSTBEG00000009172
ATGGCGCCCGTGAAAAAGCTTGTGGCGAAGGGGGGCAAAAAAAAGAAGCAGGTTCTGAAGTTTACCCTTGATTGCACCCA
CCCGGTAGAAGATGGAATCATGGATGCTGCCAATTTTGAGCAGTTTCTCCAAGAGAGAATCAAAGTGAATGGAAAAGCTG
GGAATCTTGGTGGAGGTGTTGTAACCATTGAAAGGAGCAAGAGTAAGATCACTGTAACTTCTGAGGTGCCTTTTTCCAAA
AGGTATTTGAAATATCTCACCAAAAAATATTTGAAGAAGAATAATCTACGTGATTGGTTGCGCGTAGTTGCTAACAGCAA
AGAGAGTTACGAATTACGTTACTTCCAGATTAACCAGGATGAAGAAGAGGAGGAAGATGAGGATTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009864 ortholog_one2one 7 retrogenes
retro_amel_1219, retro_amel_1247, retro_amel_1775, retro_amel_1793, retro_amel_369, retro_amel_830, retro_amel_870,
Bos taurus ENSBTAG00000014423 ortholog_one2one 4 retrogenes
retro_btau_1491, retro_btau_566, retro_btau_694, retro_btau_892,
Choloepus hoffmanni ENSCHOG00000007477 ortholog_one2one 2 retrogenes
retro_chof_1785, retro_chof_2537,
Callithrix jacchus ENSCJAG00000000132 ortholog_one2one 12 retrogenes
retro_cjac_1032, retro_cjac_1055, retro_cjac_1257, retro_cjac_1301, retro_cjac_2352, retro_cjac_2436, retro_cjac_2874, retro_cjac_2954, retro_cjac_3925, retro_cjac_472, retro_cjac_611, retro_cjac_867,
Dasypus novemcinctus ENSDNOG00000013166 ortholog_one2one 8 retrogenes
retro_dnov_1282, retro_dnov_1523, retro_dnov_2043, retro_dnov_2126, retro_dnov_38, retro_dnov_382, retro_dnov_425, retro_dnov_567,
Felis catus ENSFCAG00000006320 ortholog_one2one 3 retrogenes
retro_fcat_1591, retro_fcat_1656, retro_fcat_1715,
Homo sapiens ENSG00000116251 ortholog_one2one 16 retrogenes
retro_hsap_1162, retro_hsap_1299, retro_hsap_1445, retro_hsap_1720, retro_hsap_2136, retro_hsap_2138, retro_hsap_2142, retro_hsap_2306, retro_hsap_2315, retro_hsap_349, retro_hsap_3814, retro_hsap_485, retro_hsap_4865, retro_hsap_4909, retro_hsap_600, retro_hsap_726,
Gorilla gorilla ENSGGOG00000027739 possible_ortholog 10 retrogenes
retro_ggor_1111, retro_ggor_1652, retro_ggor_1655, retro_ggor_1708, retro_ggor_1757, retro_ggor_2268, retro_ggor_2567, retro_ggor_37, retro_ggor_531, retro_ggor_613,
Loxodonta africana ENSLAFG00000006352 ortholog_one2one 5 retrogenes
retro_lafr_1100, retro_lafr_380, retro_lafr_649, retro_lafr_981, retro_lafr_993,
Macaca mulatta ENSMMUG00000018347 possible_ortholog 12 retrogenes
retro_mmul_1004, retro_mmul_1044, retro_mmul_1047, retro_mmul_1512, retro_mmul_2209, retro_mmul_2264, retro_mmul_2467, retro_mmul_2601, retro_mmul_271, retro_mmul_445, retro_mmul_469, retro_mmul_80,
Mustela putorius furo ENSMPUG00000007087 ortholog_one2many 6 retrogenes
retro_mputfur_1074, retro_mputfur_1277, retro_mputfur_134, retro_mputfur_1433, retro_mputfur_578, retro_mputfur_873,
Mus musculus ENSMUSG00000028936 ortholog_one2one 5 retrogenes
retro_mmus_1883, retro_mmus_1906, retro_mmus_2123, retro_mmus_2459, retro_mmus_3171,
Nomascus leucogenys ENSNLEG00000010337 ortholog_one2one 10 retrogenes
retro_nleu_1309, retro_nleu_2354, retro_nleu_2367, retro_nleu_2509, retro_nleu_2747, retro_nleu_2772, retro_nleu_2783, retro_nleu_2881, retro_nleu_2946, retro_nleu_3003,
Otolemur garnettii ENSOGAG00000014776 ortholog_one2one 7 retrogenes
retro_ogar_1116, retro_ogar_1415, retro_ogar_1418, retro_ogar_2188, retro_ogar_2979, retro_ogar_399, retro_ogar_917,
Pongo abelii ENSPPYG00000001951 ortholog_one2one 11 retrogenes
retro_pabe_1196, retro_pabe_1213, retro_pabe_1435, retro_pabe_166, retro_pabe_248, retro_pabe_3114, retro_pabe_349, retro_pabe_3782, retro_pabe_3817, retro_pabe_590, retro_pabe_966,
Pan troglodytes ENSPTRG00000000076 ortholog_one2one 14 retrogenes
retro_ptro_1562, retro_ptro_1563, retro_ptro_1630, retro_ptro_1690, retro_ptro_2596, retro_ptro_275, retro_ptro_3056, retro_ptro_3240, retro_ptro_365, retro_ptro_502, retro_ptro_517, retro_ptro_795, retro_ptro_950, retro_ptro_984,
Rattus norvegicus ENSRNOG00000011104 ortholog_one2one 5 retrogenes
retro_rnor_1315, retro_rnor_1687, retro_rnor_2089, retro_rnor_2149, retro_rnor_439,
Sus scrofa ENSSSCG00000003367 ortholog_one2one 4 retrogenes
retro_sscr_257, retro_sscr_276, retro_sscr_497, retro_sscr_509,
Tupaia belangeri ENSTBEG00000000357 within_species_paralog 17 retrogenes
retro_tbel_1135, retro_tbel_1188, retro_tbel_2011, retro_tbel_2073, retro_tbel_2081, retro_tbel_226, retro_tbel_2325, retro_tbel_2333, retro_tbel_2434, retro_tbel_2936, retro_tbel_3526, retro_tbel_3796, retro_tbel_4070, retro_tbel_4372, retro_tbel_4573, retro_tbel_4681, retro_tbel_575,
Tursiops truncatus ENSTTRG00000010488 ortholog_one2one 8 retrogenes
retro_ttru_1268, retro_ttru_147, retro_ttru_1519, retro_ttru_1564, retro_ttru_1739, retro_ttru_413, retro_ttru_714, retro_ttru_871,
Vicugna pacos ENSVPAG00000009466 ortholog_one2one 1 retrogene
retro_vpac_330,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_397 90.70 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_tbel_504 91.41 99.22
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_tbel_582 77.87 91.41
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_tbel_659 75.40 97.66
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_tbel_680 93.80 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_tbel_755 82.11 73.44
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_tbel_920 71.90 92.19
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_tbel_1047 67.06 63.28
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_tbel_1181 83.59 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_tbel_1263 60.50 87.50
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_tbel_1422 91.46 64.06
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_tbel_1773 85.04 99.22
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_tbel_1951 80.62 99.22
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_tbel_2121 89.06 100.00
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_tbel_2182 85.00 92.19
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_tbel_2231 93.14 78.91
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_tbel_2429 84.82 87.50
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_tbel_2452 71.11 100.00
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_tbel_2801 57.03 98.44
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_tbel_2923 95.35 100.00
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_tbel_3090 60.00 76.56
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_tbel_3160 71.58 73.44
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_tbel_3265 93.22 92.19
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_tbel_3362 65.89 96.88
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_tbel_3482 84.96 86.72
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_tbel_3719 75.78 100.00
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_tbel_3885 62.12 100.00
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_tbel_3960 70.00 76.56
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_tbel_4199 69.60 96.88
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_tbel_4225 88.37 99.22
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_tbel_4386 77.89 71.09
Please wait, loading
Please wait, loading
Please wait, loading
32. retro_tbel_4437 67.94 100.00
Please wait, loading
Please wait, loading
Please wait, loading
33. retro_tbel_4607 87.02 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTBEG00000009172 retrocopies