RetrogeneDB ID: | retro_tbel_2801 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_119459:22350..22719(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 57.03 % |
Parental protein coverage: | 98.44 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MAPVKKLVAK-GGKKKKQVLKFTLDCTH-PVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS |
MAP.KK.VAK.G....K..LKFT.D.TH.P.E.G..DA..FE.F.QERIKV.GKA.NL.GG.V.IE..K. | |
Retrocopy | MAPFKKHVAK>GXXXXK*ILKFTFDWTH<PAEAGLVDAGHFELFFQERIKVKGKAENLSGGIVIIEWNKN |
Parental | KITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEED |
KI........SKR..K.LTKK.L.KN.L.DWL...AN.KESY...YFQ..QDEE.E.. | |
Retrocopy | KINF*GAL--SKRNSK*LTKKHL-KNHLCDWLHIDANRKESYKVCYFQLTQDEEKEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |