RetrogeneDB ID: | retro_tbel_3362 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_138334:127161..127531(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 65.89 % |
Parental protein coverage: | 96.88 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | VKKLVAK-GGKKKKQVLKFTLDCTHPVEDGIMDAAN-FEQFLQERIKVNGKAGNL-GGGV-VTIERSKSK |
VKK.VAK.GG..KK..LKFTLDCT....D.IMDAAN.F.QFLQE.I.VN..AGNL.GG...VTIER.K.K | |
Retrocopy | VKKPVAK<GGHEKKWGLKFTLDCTQLIAD*IMDAAN>F*QFLQESISVNRRAGNLSGGRL<VTIERRKNK |
Parental | ITVTSEVP-FSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDE |
IT.TS..P.FSKRYLK.LTK.YLK.NNL.D.L...ANSK......Y.QI.QD.EEEEDE | |
Retrocopy | ITLTSKLP<FSKRYLKCLTKSYLKENNLHDRLHIAANSK-GHMNYYYQIKQDVEEEEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |