RetrogeneDB ID: | retro_tbel_2429 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_110597:82627..82963(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 84.82 % |
Parental protein coverage: | 87.5 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | QVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYL |
QVLKFTL...HPV.DGI.DAANFEQFLQERIK...KAGNLGGGVVTIERSKSK.TVTSEV.FSKRYLKYL | |
Retrocopy | QVLKFTLEYPHPVKDGIKDAANFEQFLQERIK*MEKAGNLGGGVVTIERSKSKVTVTSEVTFSKRYLKYL |
Parental | TKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
TK..LKKNNL.D.L.VVANS.ESY.LRYFQINQDEEEEEDED | |
Retrocopy | TKIFLKKNNLCD*LHVVANSQESYKLRYFQINQDEEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |