RetrogeneDB ID: | retro_tbel_1773 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_570:106891..107269(-) | ||
Located in intron of: | ENSTBEG00000011136 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 85.04 % |
Parental protein coverage: | 99.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAPVKKLVAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKI |
MAPVKKLVAKG.KKK.Q.LKFT.D.THPVEDGI.DAANFEQFLQERIKVNGKAG.LGGG.VT.ERSKS.I | |
Retrocopy | MAPVKKLVAKGSKKK-QALKFTVDSTHPVEDGITDAANFEQFLQERIKVNGKAGTLGGGIVTTERSKSTI |
Parental | TVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDE |
.VTSEVPFSKRYLKYLT.KYLKKNNL.D.L.VVANSKESY.L.Y.QINQDEEEEED. | |
Retrocopy | IVTSEVPFSKRYLKYLTQKYLKKNNLCDSLHVVANSKESYKLHYLQINQDEEEEEDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |