RetrogeneDB ID: | retro_tbel_2182 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_103822:8002..8362(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 85. % |
Parental protein coverage: | 92.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK |
GG.KKKQVLKFTLDCTH.VED.IMDAANF..FL.ERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK | |
Retrocopy | GGNKKKQVLKFTLDCTHLVEDEIMDAANF*HFLRERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSK |
Parental | RYLKYL--TKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
RYLK....T...LKKNNL..WLR.VANSKE.YE.RYFQINQDEEEEEDED | |
Retrocopy | RYLKHFTHTXXXLKKNNLHYWLRIVANSKEGYE*RYFQINQDEEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |