RetrogeneDB ID: | retro_tbel_4607 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_92899:1448..1829(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000013706 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL22 | ||
Ensembl ID: | ENSTBEG00000009172 | ||
Aliases: | None | ||
Description: | ribosomal protein L22 [Source:HGNC Symbol;Acc:10315] |
Percent Identity: | 87.02 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MAPVKKLV-AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFL-QERIKVNGKAGNLGGGVVTIERSKS |
MAPVKKLV.AKGG...KQ.LKF.LDCTHPVEDGIM.AANFEQFL.QERI.VNGKAGNLGGGVVT.ERSKS | |
Retrocopy | MAPVKKLV<AKGGXXXKQFLKFPLDCTHPVEDGIMGAANFEQFL<QERITVNGKAGNLGGGVVTTERSKS |
Parental | KITVTSE-VPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEDED |
KITVTS..VPFSKRYLKYLT.KYLKKNNLR.WLR.VAN.KESYEL.YFQINQDEEEEEDED | |
Retrocopy | KITVTSG<VPFSKRYLKYLTQKYLKKNNLRNWLRIVANNKESYELGYFQINQDEEEEEDED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |